What’s new in metagenomics ?

Thursday 25 July 2013
by  Claudie
popularity : 4%

The methodological step is almost completed. Three NGS protocols (based on dsRNA, viral particules and siRNA), which have already been used for the detection of plant viruses, have been tested.

In addition, two additional "in-house" and commercial protocols have been tested.

Taken together, 5 protocols have been tested on the six plant-models studied in the frame of the project. The efficiency of these 5 metagenomics methods will be assessed by the end of September 2013. The chosen method for the validation step of the metagenomics approach will be presented during the intermediate meeting of SafePGR that will be held at Montpellier (Sept.30 th- Oct. 4th).


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